BioMiner Indexd

A hash-based data indexing and tracking service providing globally unique identifiers for omics data files. Similar to Indexd, but with enhanced features for biomedical research.

Build Status License Latest Release

Key Features

Powerful tools for managing and tracking omics data

Global Unique Identifiers

Generate and manage globally unique identifiers for each data file with comprehensive metadata tracking.

File Location Tracking

Track file locations across multiple repositories (OSS, S3, GSA, NODE, SRA, ENA) with automatic synchronization.

Multi-Version Management

Manage different versions of files with Base UUID indexing for comprehensive version control.

Quick Start

1
Install BioMiner Indexd

Download the latest release from our GitHub repository

2
Configure Database

Set up PostgreSQL and configure environment variables

3
Start Service

Launch the service and begin indexing your data files

Get Started

AI Copilot

Experience the future of data exploration with our AI-powered assistant. Ask questions, discover datasets, and get intelligent insights about your omics data.

  • Natural language queries
  • Intelligent dataset recommendations
  • Real-time data analysis
Try Copilot